Laser Chemistry and Laser Material Sciences

Laser Spectroscopy and Material Modification

Team Members

lhlm Tveryanovich YuS

Yuriy Stanislavovich Tveryanovich

Professor

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007-911-7515094
room. 202 (Ul’yanovskaya 5)

Publons | ORCID: 0000-0003-4343-9817

lhlm Povolozkiy AV

Dr. Alexey Valer’evich Povolotskiy

Associate Professor

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Publons | ORCID: 0000-0001-7931-9572 | Scopus Author ID: 8419724900

lhlm Mereshzenko AS

Dr. Andrey Sergeevich Mereshchenko

Associate Professor

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007-951-6775465
room 2012, 229 (Ul’yanovskaya 5)

Publons | ORCID: 0000-0001-9390-1446

lhlm Tverjanovich AS

Andrey Stanislavovich Tverjanovich

Associate Professor

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room. 1168

ORCID: 0000-0002-0795-8188

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Mikhail Nikilaevich Ryazantsev

Associate Professor

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ORCID: 0000-0003-3413-1706 | SCOPUS ID: 25722313700

lhlm Panov MS

Maxim S. Panov

Ph.D., research associate

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007-921-9221101
5 Ulyanovskaya str., office room # 234

ORCID: 0000-0002-6817-407X | Scopus ID: 35311716300

foc Ostras AS

Alexey Sergeevich Ostras’

Master student

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Podryadova Kristina Andreevna

Kristina Andreevna Podryadova

Master student

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Fazletdinov Timur Ravilevich

Timur Ravil’evich Fazletdinov

Master student

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Vladimir Nikolaevich Mironov

Master student

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Smirnov Egor Vyacheslavovich

Egor Vyacheslavovich Smirnov

Master student

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Smirnova Oksana

Oksana Smirnova

Master student

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Bogdan Yur’evich Lepihov

Master student

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Hristina Yanisovna Shahbazova

Master student

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Nosov Viktor Gennadevich

Viktor Gennad’evich Nosov

undergraduate student

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Vasileva Marina Sergeevna

Marina Sergeevna Vasil’eva

undergraduate student

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Nikitin Kirill Denisovich

Kirill Denisovich Nikitin

undergraduate student

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Saitov Yan Eduardovich

Yan Eduardovich Saitov

undergraduate student

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Badikov Aleksandr Romanovich

Aleksandr Romanovic Badikov

undergraduate student

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International collaboration

ColleagueJoint Publications

Prof. E. Bychkov,

Université du Littoral Côte d'Opale, France

  • Soignard, E.; Tsiok, O.; Tverjanovich, A.; Bytchkov, A.; Sokolov, A.; Brazhkin, V.; Benmore, C.; Bychkov, E., Pressure-Driven Chemical Disorder in Glassy As2S3 up to 14.7 GPa, Post-Densification Effects and Applications in Materials Design, Journal of Physical Chemistry B, 2020, 124, 430-442. DOI:10.1021/acs.jpcb.9b10465.
  • Andrey Tverjanovich, Evgenii N. Borisov, Mohammad Kassem, Pascal Masselin, Daniele Fontanari, Eugene Bychkov, Intrinsic second-order nonlinearity in chalcogenide glasses containing HgI2, Journal of the American Ceramic Society, 2020,103, 3070-3075. DOI: 10.1111/jace.17026.
  • V.V. Brazhkin, E. Bychkov, A.S. Tver’yanovich, O.B. Tsiok, High-Precision Studies of the Compressibility and Relaxation of g-As2S3 Glasses at High Hydrostatic Pressures up to 8.6 GPa. J. Exp. Theor. Phys. 130, 571–578 (2020). DOI: 10.1134/S1063776120030024
  • Mohammad Kassem, Maria Bokova, Andrey S. Tverjanovich, Daniele Fontanari, David Le Coq, Anton Sokolov, Pascal Masselin, Shinji Kohara, Takeshi Usuki, Alex C Hannon, Chris J. Benmore, and Eugene Bychkov, Bent HgI2 Molecules in the Melt and Sulfide Glasses: Implications for Non-Linear Optics, Chemistry of Materials, 31, 11, (2019) 4103-4112, DOI: 10.1021/acs.chemmater.9b00860
  • Andrey Tverjanovich, Arnaud Cuisset, Daniele Fontanari, Eugene Bychkov, Structure of Se-Te glasses by Raman spectroscopy and DFT modeling. Journal of the American Ceramic Society 2018 V101 No11 P.5188-5197, DOI: 10.1111/jace.15758
F.S.Khan, Department of Advanced Interdisciplinary Studies, School of Engineering, University of Tokyo, Japan
  • F.S.Khan, M.Sugiyama, K.Fujii, Yu.S.Tver'yanovich, Y.Nakano. Electrochemical reduction of CO2 using Germanium-Sulfide-Indium amorphous glass structures. Heliyon, Volume 6, Issue 4, (2020), e03513. https://doi.org/10.1016/j.heliyon.2020.e03513
  • A. Razumtsev, Yu. S. Tver’yanovich, Fahd S. Khan, I. E. Kolesnikov, A. V. Kurochkin. Spectral properties of glass (15Ga2S3 · 85GeS2) doped with erbium. Glass Physics and Chemistry. 2017, Volume 43, Issue 4, pp 298–301 .
S. Bereznev, Tallin Technical University, Estonia

A. Tverjanovich, A. Grevtsev and S. Bereznev, Interaction of CuCl2 with poly(ethylene glycol) under microwave radiation Mater. Res. Express 4 N1 (2017) 015006. DOI: 10.1088/2053-1591/aa52d0

Prof. T.Wagner, Pardubice University, Czech republic

Himics, D., Strizik, L., Holubova, J., Benes, L., Palka, K., Frumarova, B., Oswald, J., Tverjanovich, A.S., Wagner, T, Physico-chemical and optical properties of Er3+-doped and Er3+/Yb3+-co-doped Ge25Ga9.5Sb0.5S65 chalcogenide glass, Pure and Applied Chemistry, V. 89, Issue 4, 1 April 2017, Pages 429-436. DOI 10.1515/pac-2016-1103.

Prof. Michael F. Brown, University of Arizona, Tucson, AZ, USA
  • Struts, A.V., Xu, X., Molugu, T.R., Perera, S.M., Faylough, S., Guruge, C., Nascimento, C.L., Ryazantsev, M.N. and Brown, M.F., 2020. Active Rhodopsin Chromophore Conformation Revealed by Solid-state 2H NMR and QM/MM Simulations. Biophysical Journal, 118(3).
  • Ryazantsev, M.N., Nikolaev, D.M., Struts, A.V. and Brown, M.F., 2019. Quantum mechanical and molecular mechanics modeling of membrane-embedded rhodopsins. The Journal of Membrane Biology, 252(4-5), pp.425-449.
  • Struts, A.V., Ryazantsev, M.N., Xu, X., Molugu, T.R., Perera, S.M., Guruge, C., Faylough, S., Nascimento, C., Nesnas, N. and Brown, M.F., 2019. Retinal Flipping During Rhodopsin Activation Revealed by Solid State 2H NMR and QM/MM Simulations. Biophysical Journal, 116(3), p.204a.
Prof. Massimo Olivucci, University of Siena, Italy.
  • Nikolaev, D.M., Shtyrov, A.A., Panov, M.S., Jamal, A., Chakchir, O.B., Kochemirovsky, V.A., Olivucci, M. and Ryazantsev, M.N., 2018. A comparative study of modern homology modeling algorithms for rhodopsin structure prediction. ACS omega, 3(7), pp.7555-7566.
Adeel Jamal, Massachusetts Institute of Technology (MIT), Cambridge, MA, USA
  • Nikolaev, D.M., Shtyrov, A.A., Panov, M.S., Jamal, A., Chakchir, O.B., Kochemirovsky, V.A., Olivucci, M. and Ryazantsev, M.N., 2018. A comparative study of modern homology modeling algorithms for rhodopsin structure prediction. ACS omega, 3(7), pp.7555-7566.
  • Ryazantsev, M.N., Jamal, A., Maeda, S. and Morokuma, K., 2015. Global investigation of potential energy surfaces for the pyrolysis of C 1–C 3 hydrocarbons: toward the development of detailed kinetic models from first principles. Physical Chemistry Chemical Physics, 17(41), pp.27789-27805.
  • Muzangwa, L.G., Yang, T., Parker, D.S., Kaiser, R.I., Mebel, A.M., Jamal, A., Ryazantsev, M. and Morokuma, K., 2015. A crossed molecular beam and ab initio study on the formation of 5-and 6-methyl-1, 4-dihydronaphthalene (C 11 H 12) via the reaction of meta-tolyl (C 7 H 7) with 1, 3-butadiene (C 4 H 6). Physical Chemistry Chemical Physics, 17(12), pp.7699-7706.
Prof. Ralf I. Kaiser, University of Hawaii Manoa, Honolulu, HI, USA

Muzangwa, L.G., Yang, T., Parker, D.S., Kaiser, R.I., Mebel, A.M., Jamal, A., Ryazantsev, M. and Morokuma, K., 2015. A crossed molecular beam and ab initio study on the formation of 5-and 6-methyl-1, 4-dihydronaphthalene (C 11 H 12) via the reaction of meta-tolyl (C 7 H 7) with 1, 3-butadiene (C 4 H 6). Physical Chemistry Chemical Physics, 17(12), pp.7699-7706.

Alexey Melnikov, Fritz Haber Institute of the Max Planck Society, Berlin, Germany
  • A. Melnikov, A. Povolotskiy, U. Bovensiepen, Magnon-enhanced phonon damping at Gd(0001) and Tb(0001) surfaces using femtosecond time-resolved optical second-harmonic generation, Physical Review Letters, (2008) 100(24), 247401.
  • A. Melnikov, I. Radu, A. Povolotskiy, T. Wehling, A. Lichtenstein, U. Bovensiepen, Ultrafast dynamics at lanthanide surfaces: Microscopic interaction of the charge, lattice and spin subsystems, Journal of Physics D: Applied Physics, (2008) 41(16), 164004.
Erkki M. Lãhderanta, Lappeenrannan Teknillinen Yliopisto, Lappeenranta, Finland
  • A.P. Shablinskii, I.E. Kolesnikov, R.S. Bubnova, A.V. Povolotskiy, E. Lähderanta, S.K. Filatov, A novel thermally stable Ba3Bi2(BO3)4:Eu3+ red phosphor for solid state lighting application, Journal of Luminescence, (2019) 216,116714.
  • I.E. Kolesnikov, A.V. Povolotskiy, D.V. Mamonova, E.Y. Kolesnikov, A.V. Kurochkin, E. Lähderanta, M.D. Mikhailov, Asymmetry ratio as a parameter of Eu3+ local environment in phosphors, Journal of Rare Earths, (2018) 36(5), с. 474-481/
  • I.E. Kolesnikov, A.V. Povolotskiy, D.V. Mamonova, E. Lähderanta, A.A. Manshina, M.D. Mikhailov, Photoluminescence properties of Eu3+ ions in yttrium oxide nanoparticles: Defect: Vs. Normal sites, RSC Advances, (2016) 6(80), p. 76533-76541.

Dr. Daniel Rolles,

Deutsches Elektronen-Synchrotron (DESY), FS-FL, Hamburg, Germany

Department of Physics, Kansas State University, USA

  • Allum, F.; Burt, M.; Amini, K.; Boll, R.; Köckert, H.; Olshin, P.K.; Bari, S.; Bomme, C.; Brauße, F.; Cunha de Miranda, B.; Düsterer, S.; Erk, B.; Géléoc, M.; Geneaux, R.; Gentleman, A. S.; Goldsztejn, G.; Guillemin, R.; Holland, D. M. P.; Ismail, I.; Johnsson, P.; Journel, L.; Küpper, J.; Lahl, J.; Lee, J. W. L.; Maclot, S.; Mackenzie, S. R.; Manschwetus, B.; Mereshchenko, A. S.; Mason, R; Palaudoux, J.; Piancastelli, M. N.; Penent, F.; Rompotis, D.; Rouzée, A.; Ruchon, T.; Rudenko, A.; Savelyev, E.; Simon, M.; Schirmel, N.; Stapelfeldt, H.; Techert, S.; Travnikova, O.; Trippel, S.; Underwood, J.G.; Vallance, C.; Wiese, J.; Ziaee, F.; Brouard, M.; Marchenko, T.; Rolles, D. "Coulomb explosion imaging of CH3I and CH2ClI photodissociation dynamics" J. Chem. Phys., 2018, 149, 204313.
  • Brauße, F.; Goldsztejn, G; Amini, K.; Boll, R.; Bari, S.; Bomme, C.; Brouard, M.; Burt, M.; Cunha de Miranda, B.; Düsterer, S.; Erk, B.; Géléoc, M.; Geneaux, R.; Gentleman, A. S.; Guillemin, R.; Ismail, I.; Johnsson, P.; Journel, L; Kierspel, T.; Köckert, H.; Küpper J.; Lablanquie, P.; Lahl, J.; Lee, J. W. L.; Mackenzie, S. R.; Maclot, S.; Manschwetus, B.; Mereshchenko, A. S.; Mullins, T.; Olshin, P. K.; Palaudoux, J.; Patchkovskii, S.; Penent, F.; Piancastelli, M. N.; Rompotis, D.; Ruchon, T.; Rudenko, A.; Savelyev, E.; Schirmel, N.; Techert, S.; Travnikova, O.; Trippel, S.; Underwood, J. G.; Vallance, C.; Wiese, J.; Simon, M.; Holland, D. M. P.; Marchenko, T.; Rouzée, A.; Rolles, D. “Time-resolved inner-shell photoelectron spectroscopy: From a bound molecule to an isolated atom” Phys. Rev. A, 2018, 97, 043429.
  • Burt, M.; Boll, R.; Lee, J. W. L.; Amini, K.; Köckert, H.; Vallance, C.; Gentleman, A.S.; Mackenzie, S.R.; Bari, S.; Bomme ,C.; Düsterer, S.; Erk, B.; Manschwetus, B.; Müller, E.; Rompotis, D.; Savelyev, E.; Schirmel, N.; Techert, S.; Treusch, R.; Küpper, J.; Trippel, S.; Wiese, J.; Stapelfeldt, H.; Cunha de Miranda, B.; Guillemin, R.; Ismail, I.; Journel, L.; Marchenko, T.; Palaudoux, J., Penent, F.; Piancastelli, M. N.; Simon, M.; Travnikova, O.; Brausse, F.; Goldsztejn, G.; Rouzée, A.; Géléoc, M.; Geneaux, R.; Ruchon, T.; Underwood, J.; Holland, D. M. P.; Mereshchenko, A. S.; Olshin, P. K.; Johnsson, P.; Maclot, S.; Lahl, J.; Rudenko, A.; Ziaee, F.; Mark Brouard, M.; Rolles, D. “Coulomb-explosion imaging of concurrent CH2BrI photodissociation dynamics” Phys. Rev. A, 2017, 96, 043415.

Dr. Alexander Tarnovsky

Center for photochemical sciences

Bowling Green State University, Bowling Green, OH, USA

  • Mereshchenko, A.S.; Myasnikova O.S.; Panov, M.S.; Kochemirovsky, V.A.; Skripkin, M.Yu.; Budkina, D.S.; Tarnovsky, A.N. "Solvent Effects on Nonradiative Relaxation Dynamics of Low-Energy Ligand-Field Excited States: A CuCl42– Complex"J. Phys. Chem. B., 2017, 121, 4562-4568.
  • Mereshchenko, A.S.;Olshin,P.K; Myasnikova,O.S.; Panov, M.S.;Kochemirovsky,V.A.; Skripkin, M.Yu.;Moroz, P.N.;Zamkov, M.;Tarnovsky, A.N. “Ultrafast Photochemistry of Copper(II) Monochlorocomplexes in Methanol and Acetonitrile by Broadband Deep-UV-to-Near-IR Femtosecond Transient Absorption Spectroscopy” J. Phys. Chem. A., 2016,120, 1833-1844.
  • Mereshchenko, A. S.;Olshin, P.K.; Karabaeva, K.E.; Panov, M.S.; Wilson, R.M.; Kochemirovsky, V.A.; Skripkin, M. Yu.; Tveryanovich, Yu. S.; Tarnovsky, A. N. "Mechanism of Formation of Copper(II) Chloro Complexes Revealed by Transient Absorption Spectroscopy and DFT/TDDFT Calculations" J. Phys. Chem. B., 2015, 119, 8754–8763.
  • Mereshchenko, A. S.; Butaeva, E.V.; Borin, V. A.; Eyzips, A. A.; Tarnovsky, A. N. “Roaming-Mediated Ultrafast Isomerization of Geminal Tri-Bromides” Nature Chemistry, 2015,7, 562-568.

Dr. Suman Kalyan Pal

School of Basic Sciences, Indian Institute of Technology Mandi, Mandi, Himachal Pradesh, India

  • Pal, S. K..; Mereshchenko, A. S.; Butaeva, E.V.; El-Khoury, P.; Tarnovsky, A. “Global Sampling of the Photochemical Reaction Paths of Bromoform by Ultrafast Deep-UV through Near-IR Transient Absorption and Ab Initio Multiconfigurational Calculations.” J. Chem. Phys., 2013, 138, 124501.
  • Mereshchenko, A. S.; Pal, S. K.; Karabaeva, K. E.; El-Khoury, P. Z.; Tarnovsky, A. N. “The Photochemistry of Monochloro Complexes of Copper (II) in Methanol Probed by Ultrafast Transient Absorption Spectroscopy.” J. Phys. Chem. A, 2012, 116, 2791-2799.
  • Pal, S. K.; Mereshchenko, A.S.; El-Khoury, P.Z.; Tarnovsky, A.N. “Femtosecond Photolysis of CH2Br2 in Acetonitrile: Capturing the Bromomethyl Radical and Bromine-atom Charge Transfer Complex through Deep-to-near UV Probing.” Chem. Phys. Lett., 2011, 507, 69-73.
  • El-Khoury, P.Z.; Pal, S.K.; Mereshchenko, A.S.; Tarnovsky, A.N. “The Formation and Back Isomerization of iso-H2C-Br-Br on a 100-ps Time Scale Following 255-nm Excitation of CH2Br2 in Acetonitrile.” Chem. Phys. Lett., 2010, 493, 61-66.

Dr. Anna Klinkova

Department of Chemistry, University of Waterloo, Waterloo, ON, Canada

Medvedeva, X.; Vidyakina, A.; Li, F.; Mereshchenko, A.; Klinkova, A. “Reductive and coordinative effects of hydrazine in structural transformations of copper hydroxide nanoparticles” Nanomaterials, 2019, 9, 1445.

Prof. Nikolai Tkachenko, Faculty of Engineering and Natural Sciences

Tampere University, Finland

Khvorost, T. A.; Beliaev, L. Y.; Potalueva, E.; Laptenkova, A. V.; Selyutin, A. A.; Bogachev, N. A.; Skripkin, M. Yu.; Ryazantsev, M. N.; Tkachenko, N. V.; Mereshchenko, A. S. “Ultrafast Photochemistry of [Cr(NCS)6]3- Complex in Dimethylsulfoxide and Dimethylformamide upon Excitation into Ligand-Field Electronic State.” J. Phys. Chem. B, 2020, 124, 3724−3733.

Main Research Directions

Super-plasticity of inorganic semiconductors (Prof. Yu. Tveryanovich)

Nowadays, flexible electronics is developing rapidly. This is due not only to the convenience of using flexible devices, but also to the possibility of placing them (including various sensors) directly on controlled moving objects, for example on human body. Because of their high fragility, classical semiconductors cannot be used in flexible electronics. Indeed, crystalline semiconductors can be formed only by covalent bonds, which are short-range and directional, and thus determine their fragility. There is fairly large number of organic semiconductors, various kinds of "ink" for printing electronic circuits, etc. However, using them is associated with various difficulties, including rapid degradation of their properties, problems in controlling their electrical properties, and a number of other difficulties. Overcoming them would require much effort and time. This is why the possibility of creating crystalline inorganic semiconductors with high ductility is extremely attractive. This problem also has another aspect.

tveryanovich 01 tveryanovich 02tveryanovich 03
The grid of Ag-Ag chemical bonds for Ag2Se that ensures its plasticity
Ingot of Ag2S before and after cold pressing

We are talking about fragility of glassy semiconductors or chalcogenide glasses that are also covalent substances. They are used in IR optics, particularly in the form of optical fibers and waveguides, and are also used in devices for optical recording, storage and reading of information. Giving them plasticity would significantly expand the scope of their application. Therefore, the discovery the plasticity in crystalline semiconductor, comparable to that in metals, launches a new direction in the development of semiconductor materials for flexible electronics.


Laser-induced modification (Dr. Povolotskiy A.V.)

tveryanovich 04To date, organic materials treated with laser radiation have been increasingly used in the design and manufacture of optical elements. PMMA is one of the widely used polymeric materials in optics and optoelectronics. The main advantages of PMMA are a wide transparency window, the possibility of forming both bulk and film materials. Laser modification of PMMA allows creating color centers with radiation in a wide spectral range. Laser-assisted modification of PMMA thin films lead to the white-light color centers formation with quantum efficiency up to 38 %. Wide spectral range of PMMA luminescence excitation, allows creating a white light source based on LEDs with any wavelength in UV-vis region.

(a) Photoluminescence spectrum and (b) chromaticity diagram at 360 nm excitation for laser modified PMMA film. (c) Example of mPMMA application for white light emission.


Molecular-plasmon nanostructures for biomedical application (Dr. Povolotskiy A.V.)

tveryanovich 05The development of modern nanotechnology opens new opportunities in the design of hybrid structures. This work is devoted to the general view on hybrids, which are based on metal nanoparticles and molecules. Functional properties of nanostructures that have a biomedical application are presented, including singlet oxygen generation for photodynamic therapy, photo-induced heating for photothermal therapy, photo-induced reactions for chemotherapy, luminescent thermometry and surface enhanced Raman scattering for drug delivery control etc. The association of nanostructures into hybrids allows to combine their functional properties and create universal preparations for controlled complex therapy.

The diagram of bio- and medicine hybrid nanostructures application.


Structure and properties of chalcogenide glasses. Chalcogenide glasses for various innovative applications: optical sensors, luminescent materials, nonlinear optical materials, IR fiber optics (Ph.D. Tverjanovich A.S.)

Mohammad Kassem, Maria Bokova, Andrey S. Tverjanovich, Daniele Fontanari, David Le Coq, Anton Sokolov, Pascal Masselin, Shinji Kohara, Takeshi Usuki, Alex C Hannon, Chris J. Benmore, and Eugene Bychkov, Bent HgI2 Molecules in the Melt and Sulfide Glasses: Implications for Non-Linear Optics, Chemistry of Materials, 31, 11, (2019) 4103-4112, DOI: 10.1021/acs.chemmater.9b00860 (IF=9,890 (2017)). (SJR=4,224) Q1(2018)

tveryanovich 06

Nonlinear optical (NLO) crystals are widely used in advanced photonic technologies for second harmonic and difference frequency generation (SHG and DFG, respectively), producing coherent light at frequencies where existing lasers are unavailable. Isotropic glasses do not exhibit SHG or DFG, except temporarily induced anisotropy under external stimuli. However, recent reports on glasses with chiral structural motifs show promising permanent NLO properties. We propose an alternative solution: hybrid molecular/network glasses with noncentrosymmetric HgI2 monomers. Mercury-(II) iodide consists of linear HgI2 triatomic molecules in the vapor phase and in the yellow orthorhombic polymorph stable above 400 K. At lower temperatures, the tetragonal red form is composed of corner-sharing HgI4/2 tetrahedra forming a layered extended framework. There is a gap in the molecular evolution; direct structural measurements of the liquid HgI2 phase are missing. Using high-energy X-ray scattering, pulsed neutron diffraction, and Raman spectroscopy supported by structural and vibrational modeling, we show that the mercury(II) iodide melt and HgI2-containing sulfide glasses are built up by bent HgI2 monomers (the bond angle ∠I−Hg−I = 156 ± 2° in the melt). The noncentrosymmetric entities imply intrinsic optical nonlinearity of the second order, confirmed by a strong SHG response.

Nikolaev, D.M., Shtyrov, A.A., Mereshchenko, A.S., Panov, M.S., Tveryanovich, Y.S. and Ryazantsev, M.N., 2020. An assessment of water placement algorithms in quantum mechanics/molecular mechanics modeling: the case of rhodopsins’ first spectral absorption band maxima. Physical Chemistry Chemical Physics, 22(32), pp.18114-18123. DOI: 10.1039/D0CP02638G (Ph.D. Ryasantsev M.N.)

tveryanovich 07Quantum mechanics/molecular mechanics (QM/MM) models are a widely used tool to obtain detailed insight into the properties and functioning of proteins. The outcome of QM/MM studies heavily depends on the quality of the applied QM/MM model. Prediction and right placement of internal water molecules in protein cavities is one of the critical parts of any QM/MM model construction. Herein, we performed a systematic study of four protein hydration algorithms. We tested these algorithms for their ability to predict X-ray-resolved water molecules for a set of membrane photosensitive rhodopsin proteins, as well as the influence of the applied water placement algorithms on the QM/MM calculated absorption maxima (λmax) of these proteins. We used 49 rhodopsins and their intermediates with available X-ray structures as the test set. We found that a proper choice of hydration algorithms and setups is needed to predict functionally important water molecules in the chromophore-binding cavity of rhodopsins, such as the water cluster in the N-H region of bacteriorhodopsin or two water molecules in the binding pocket of bovine visual rhodopsin. The QM/MM calculated λmax of rhodopsins is also quite sensitive to the applied protein hydration protocols. The best methodology allows obtaining an 18.0 nm average value for the absolute deviation of the calculated λmax from the experimental λmax. Although the major effect of water molecules on λmax originates from the water molecules located in the binding pocket, the water molecules outside the binding pocket also affect the calculated λmax mainly by causing a reorganization of the protein structure. The results reported in this study can be used for the evaluation and further development of hydration methodologies, in general, and rhodopsin QM/MM models, in particular.

Ryazantsev, M.N., Nikolaev, D.M., Struts, A.V. and Brown, M.F., 2019. Quantum mechanical and molecular mechanics modeling of membrane-embedded rhodopsins. The Journal of Membrane Biology, 252(4-5), pp.425-449. DOI 10.1007/s00232-019-00095-0 (Ph.D. Ryasantsev M.N.)

tveryanovich 08

Computational chemistry provides versatile methods for studying the properties and functioning of biological systems at different levels of precision and at different time scales. The aim of this article is to review the computational methodologies that are applicable to rhodopsins as archetypes for photoactive membrane proteins that are of great importance both in nature and in modern technologies. For each class of computational techniques, from methods that use quantum mechanics for simulating rhodopsin photophysics to less-accurate coarse-grained methodologies used for long-scale protein dynamics, we consider possible applications and the main directions for improvement.

Nikolaev, D.M., Osipov, D.E., Strashkov, D.M., Vyazmin, S.Y., Akulov, V.E., Kravtcov, D.V., Chakchir, O.B., Panov, M.S. and Ryazantsev, M.N., 2019. Molecular mechanisms of adaptation to the habitat depth in visual pigments of A. subulata and L. forbesi squids: on the role of the S270F substitution. Journal of Integrated OMICS, 9(1), pp.44-50. (Ph.D. Ryasantsev M.N.)

tveryanovich 09Revealing the mechanisms of animal adaptation to different habitats is one of the central tasks of evolutionary physiology. A particular case of such adaptation is the visual adaptation of marine species to different depth ranges. Because water absorbs more intensively longer wavelengths than shorter wavelengths, the increase of habitat depth shifts the visual perception of marine species towards the blue region. In this study, we investigated the molecular mechanisms of such visual adaptation for two squid species – Alloteuthis subulata and Loligo forbesi. These species live at different depths (200 m and 360 m, respectively) and the absorption maximum of A. subulata visual rhodopsin is slightly red-shifted compared to L. forbesi rhodopsin (499 and 494 nm, respectively). Previously, the amino acid sequences of these two species were found to differ in 22 sites with only seven of them being non-neutral substitutions, and the S270F substitution was proposed as a possible candidate responsible for the spectral shift. In this study, we constructed computational models of visual rhodopsins of these two squid species and determined the main factors that cause the 5 nm spectral shift between the two proteins. We find that the origin of this spectral shift is a consequence of a complex reorganization of the protein caused by at least two mutations including S270F. Moreover, the direct electrostatic effect of polar hydroxyl-bearing serine that replaces non-polar phenylalanine is negligible due to the relatively long distance to the chromophore.

Nikolaev, D.M., Panov, M.S., Shtyrov, A.A., Boitsov, V.M., Vyazmin, S.Y., Chakchir, O.B., Yakovlev, I.P. and Ryazantsev, M.N., 2019. Perspective tools for optogenetics and photopharmacology: from design to implementation. In Progress in Photon Science (pp. 139-172). Springer, Cham. (Ph.D. Ryasantsev M.N.)

Optogenetics and photopharmacology are two perspective modern methodologies for control and monitoring of biological processes from an isolated cell to complex cell assemblies and organisms. Both methodologies use optically active components that being introduced into the cells of interest allow for optical control or monitoring of different cellular processes. In optogenetics, genetic materials are introduced into the cells to express light-sensitive proteins or protein constructs. In photopharmacology, photochromic compounds are delivered into a cell directly but not produced inside the cell from a genetic material. The development of both optogenetics and photopharmacology is inseparable from the design of improved tools (protein constructs or organic molecules) optimized for specific applications. Herein, we review the main tools that are used in modern optogenetics and photopharmaclogy and describe the types of cellular processes that can be controlled by these tools. Although a large number of different kinds of optogenetic tools exist, their performance can be evaluated with a limited number of metrics that have to be optimized for specific applications. We classify these metrics and describe the ways of their improvement.


Controlled liquid-phase synthesis of new metal-organic frameworks. Project leader – Dr. Andrey S. Mereshchenko

tveryanovich 10The synthesis and study of the properties of metal-organic frameworks is one of the most rapidly developing areas of modern coordination chemistry. The synthesis of metal-organic frameworks is affected by numerous factors, such as the nature of organic linkers, properties of metal ion, pH value, duration of the synthesis, temperature, solvent, and the ratio of reagents.

In our laboratory, we develop a number of methods for the synthesis of these substances, such as the slow evaporation method, the solvothermal autoclave method, and the direct precipitation method. We study metal-organic frameworks based on ions 3d- (Co, Cu, Zn) and 4f-elements (Eu, Tb, Gd, Lu) coordinated with organic linkers (1,2- and 1,4-benzenedicarboxylate anions and corresponding acids, 4,4'-bipyridine) in individual (water, ethanol, dimethylformamide, dimethyl sulfoxide, dimethylacetamide) and mixed solvents. In addition to synthesis, our group is actively studying the equilibrium processes of complex formation, the kinetics and mechanisms of nonequilibrium processes in solution that lead to the formation of metal-organic frameworks. Particular attention is paid to the synthesis and analysis of luminescent metal-organic framework structures based on complexes of europium (III) and terbium (III) with aromatic carboxylic acids (for example, terephthalic acid).

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Synthesis of new nanocrystalline luminescent materials based on rare earth compounds. Project leader – Dr. Andrey S. Mereshchenko

Nowadays, luminescent materials are widely used in science, technology, and medicine. Nanocrystalline luminescent materials are actively used in medicine and biotechnology as luminescent labels for studying the structure of cells and diagnosing diseases. Particularly, upconverting luminescent materials (substances that emit light at a higher frequency than the absorbed light) are used as biomarkers, fluorescent sensors, infrared visualizers, luminescent security signs for documents and banknotes. Many rare earth compounds have pronounced luminescent properties. It is known from the literature that among the compounds of rare-earth elements, fluorine-containing compounds, for example, ReF3 or NaReF4, exhibit the brightest luminescence, and the crystalline phase and morphology of particles critically affect the luminescence properties.

In our laboratory, we synthesize nanocrystalline phosphors with mixed crystal matrix including down-converting (NaYxGdyEuzF4, NaYxLuyEuzF4, NaYxGdyTbzF4, NaYxLuyTbzF4) and up-coverting (NaYxGdyYbzTmkF4, NaYxLuyYbzTmkF4, NaYxGdyYbzErkF4, NaYxLuyYbzErkF4) luminescent materials and study the effect of concentration of the initial reagents and the synthesis conditions on the luminescence intensity. Synthesis is usually carried out by the hydrothermal method in an autoclave at the temperature of 180 degrees Celsius. We study the qualitative and phase composition of the materials as well as the size and shape of the particles.

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Ultrafast photochemistry and spectroscopy of coordination compounds. Project leader – Dr. Andrey S. Mereshchenko

Photoactive complexes of transition metals play important roles in biological processes and are actively used in various branches of science and technology. For example, copper-containing proteins play a key role in the process of photosynthesis. Compounds of platinum, iridium, osmium, and other metals of the second and third transition series are often used for anti-cancer photodynamic therapy.

In our laboratory, we the study of the photochemistry of transition metal complexes in solution with a high temporal resolution (10-13-10-6 s). The dynamics of excited states and photochemistry of complexes of copper, chromium, platinum, iridium, and other transition metals are studied using time-resolved transient absorption spectroscopy. Using this method, photo-initiated physical and chemical processes are with a time resolution of up to 15 fs, a time comparable to the period of molecular vibrations. In addition, the thermodynamics and kinetics of complex formation processes in solution are studied. To explain the experimental data, we also perform quantum chemical calculations.

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Gordeychuk, D.I., Sorokoumov, V.N. Mikhaylov, V.N., Panov, M.S., Khairullina, E.M., Melnik, M.V., Kochemirovsky, V.A., Balova, I.A. “Copper-based nanocatalysts produced via laser-induced ex situ generation for homo- and cross-coupling reactions”, Chemical Engineering Science, 2020, 14, 115940, DOI: 10.1016/j.ces.2020.115940. (Ph.D. Panov M.S.)

tveryanovich 17In this work, we propose the promising approach that provides conditions for laser-induced ex situ synthesis of Raney-like copper-based nanostructured catalysts. Their catalytic activity and selectivity were investigated in Cu-catalyzed acetylene homo-coupling, Pd/Cu-catalyzed the Sonogashira cross-coupling and Cu-catalyzed azide-alkyne cycloaddition (CAAC). It was found that the growth of particles generated within the focus of the laser beam can last even if laser irradiation is off and can be controlled by adding phenanthroline to the reaction mixture as the stabilizing ligand or by increasing its temperature and concentration. Particle size of the synthesized copper-based catalysts significantly affects the reaction selectivity. Thus, it is possible to manage the course of the catalytic reaction towards formation of either homo-coupling or cross-coupling products by changing the size of the catalytically active copper-containing particles produced during laser-induced synthesis.

Panov, M.S., Khairullina, E.M., Vshivtcev, F.S., Ryazantsev, M.N., Tumkin, I.I. “Laser-Induced Synthesis of Composite Materials Based on Iridium, Gold and Platinum for Non-enzymatic Glucose Sensing”, Materials, 2020, 13 (15), 3359, DOI: 10.3390/ma13153359. (Ph.D. Panov M.S.)

tveryanovich 18A simple approach for in situ laser-induced modification of iridium-based materials to increase their electrocatalytic activity towards enzyme-free glucose sensing was proposed. For this purpose, we deposited gold and platinum separately and as a mixture on the surface of pre-synthesized iridium microstructures upon laser irradiation at a wavelength of 532 nm. Then, we carried out the comparative investigation of their morphology, elemental and phase composition as well as their electrochemical properties. The best morphology and, as a result, the highest sensitivity (~9960 µA/mM cm2) with respect to non-enzymatic determination of D-glucose were demonstrated by iridium-gold-platinum microstructures also showing low limit of detection (~0.12 µM), a wide linear range (0.5 µM–1 mM) along with good selectivity, reproducibility and stability.

Smikhovskaia, A.V., Andrianov, V.S., Khairullina, E.M., Lebedev, D.V., Ryazantsev, M.N., Panov, M.S., Tumkin, I.I. “In situ laser-induced synthesis of copper-silver microcomposites for enzyme-free D-glucose and L-alanine sensing”, Applied Surface Science, 2019, 488, 531, DOI: 10.1016/j.apsusc.2019.05.061. (Ph.D. Panov M.S.)

tveryanovich 19In this work, we reported in situ laser-induced synthesis of sensor-active copper‑silver microcomposite. This bimetallic microelectrode exhibits highly developed surface area and good electrical conductivity, and can be successfully used for glucose and alanine sensing demonstrating decent sensitivity (31,000 μА cm−2−1 for d-glucose and 11,177 μА cm−2−1 for l-alanine) and low limit of detection (2.8 μM for d-glucose and 0.83 μM for l-alanine). High sensor activity and good electrochemical characteristics of the synthesized material can be associated with the eutectic type of the Cu-Ag system. The implemented technique is quite useful for fabrication of new promising small size sensors for enzymeless determination of different biological analytes.

Baranauskaite, V.E., Novomlinskii, M.O., Tumkin, I.I., Khairullina, E.M., Mereshchenko, A.S., Balova, I.A., Panov, M.S., Kochemirovsky, V.A. “In situ laser-induced synthesis of gas sensing microcomposites based on molybdenum and its oxides”, Composites Part B: Engineering, 2019, 157, 322, DOI: 10.1016/j.compositesb.2018.08.008. (Ph.D. Panov M.S.)

tveryanovich 20In the current paper, in situ laser-induced synthesis of gas sensing microcomposites based on molybdenum and its oxides is discussed. The influence of pH of the solutions used for deposition and optical characteristics of a dielectric substrate on electrical conductivity and sensor properties of the synthesized microdeposits is also studied. It was shown that the phase distribution in the obtained materials is consistent with temperature level in the thermal zones of the laser beam focused on the surface of a dielectric substrate of different type. In turn, highly developed surface area of these microsensors is directly responsible for their high sensitivity, short response time, and low temperature of regeneration with respect to hydrogen sulfide and ammonia. Indeed, the highest sensitivity was observed for detection of small concentration (≤50 ppm) of hydrogen sulfide at temperatures of 300–350 °C, whereas at temperatures of 300 °C or less, the deposited molybdenum-containing microstructures are applicable for the ammonia sensing. Thus, this work demonstrates that the method of laser-induced metal deposition is a promising and perspective approach for fabrication of new effective standalone micro-sized gas sensors.

Actual Grants

  • RFBR 20-03-00185 «Ag2Se plastic semiconductor in crystalline and amorphous states as a flexible electronics material» (Head of the research – Prof. Tveryanovich Yu.S.)
  • RFBR, 20-33-70025, “The effect of solvent on growth dynamics and the structure of metal-organic frame structures” (Head of the research – Dr. Mereshchenko, A. S.)
  • RFBR № 19-32-50095 «Development of new cluster materials to implement the effect of surface amplification of Raman light scattering» (Head of the research – Dr. Povolotskiy A.V..).

Publications

Key publications over the past 5 years

2020

  • Soignard, E.; Tsiok, O.; Tverjanovich, A.; Bytchkov, A.; Sokolov, A.; Brazhkin, V.; Benmore, C.; Bychkov, E., Pressure-Driven Chemical Disorder in Glassy As2S3 up to 14.7 GPa, Post-Densification Effects and Applications in Materials Design, Journal of Physical Chemistry B, 2020, 124, 430-442. DOI: 10.1021/acs.jpcb.9b10465.
  • Andrey Tverjanovich, Evgenii N. Borisov, Mohammad Kassem, Pascal Masselin, Daniele Fontanari, Eugene Bychkov, Intrinsic second-order nonlinearity in chalcogenide glasses containing HgI2, Journal of the American Ceramic Society, 2020,103, 3070-3075. DOI: 10.1111/jace.17026.
  • V.V. Brazhkin, E. Bychkov, A.S. Tver’yanovich, O.B. Tsiok, High-Precision Studies of the Compressibility and Relaxation of g-As2S3 Glasses at High Hydrostatic Pressures up to 8.6 GPa. J. Exp. Theor. Phys. 130, 571–578 (2020). DOI: 10.1134/S1063776120030024
  • M. A. Ilyushin, I. V. Shugalei, A. S. Tver’yanovich and A. V. Smirnov, Influence of the Mechanism of the Initial Stages of the Ligand Decomposition on the Initiating Ability of Cobalt(III) Ammine Tetrazolate Complexes, Russian Journal of General Chemistry, 2020, Vol. 90, No. 4, pp. 640–647. DOI: 10.1134/S1070363220040131.
  • F.S.Khan, M.Sugiyama, K.Fujii, Yu.S.Tver'yanovich, Y.Nakano. Electrochemical reduction of CO2 using Germanium-Sulfide-Indium amorphous glass structures. Heliyon, Volume 6, Issue 4, (2020), e03513. https://doi.org/10.1016/j.heliyon.2020.e03513
  • Yury S.Tveryanovich, Aleksandr A.Razumtcev, Timur R.Fazletdinov, Mariya G.Krzhizhanovskaya, Evgenii N.Borisov. Stabilization of high-temperature Ag2Se phase at room temperature during the crystallization of an amorphous film. Thin Solid Films. (Available online 17 June 2020, 138187. In Press, Journal Pre-proof.) Volume 709, 1, 2020, 138187. https://doi.org/10.1016/j.tsf.2020.138187;
  • D. M. Nikolaev, A. A. Shtyrov, A. S. Mereshchenko, M. S. Panov, Yu. S. Tveryanovich M. N. Ryazantsev. “An assessment of the influence of applied water placement algorithms on Quantum Mechanics/Molecular Mechanics model quality: The case of rhodopsins first spectral absorption band maxima” Phys. Chem. Chem. Phys., 2020,22, 18114-18123. https://doi.org/10.1039/D0CP02638G
  • Yury S.Tveryanovich, Aleksandr A.Razumtcev, Timur R.Fazletdinov, Andrey S.Tverjanovich. Superionic nanolayered structure based on amorphous Ag2Se. Journal of Physics and Chemistry of Solids. Volume 148; (2020) N109731; https://doi.org/10.1016/j.jpcs.2020.109731;
  • Yu S Tveryanovich, G O Abdrashitov, L G Menchikov, "Effect of the magnetic field on the size of nanoparticles obtained by ablation of a cobalt – copper target in a liquid", QUANTUM ELECTRON, 2020, 50 (9), 861–865; DOI: https://doi.org/10.1070/QEL17301;
  • Vidyakina, A.A.; Kolesnikov, I. E.; Bogachev, N. A.; Skripkin, M. Y.; Tumkin, I. I.; Lähderanta, E.; Mereshchenko, A.S. “Gd3+-Doping Effect on Upconversion Emission of NaYF4: Yb3+, Er3+/Tm3+ Microparticles” Materials, 2020, 13, 3397.
  • Gordeychuk, D.I., Sorokoumov, V.N. Mikhaylov, V.N., Panov, M.S., Khairullina, E.M., Melnik, M.V., Kochemirovsky, V.A., Balova, I.A. Copper-based nanocatalysts produced via laser-induced ex situ generation for homo- and cross-coupling reactions (2020) Chemical Engineering Science, 227, 115940, DOI: 10.1016/j.ces.2020.115940.
  • Nikolaev, D.M., Shtyrov, A.A., Mereshchenko, A.S., Panov, M.S., Tveryanovich, Y.S., Ryazantsev, M.N. An assessment of water placement algorithms in quantum mechanics/molecular mechanics modeling: The case of rhodopsins' first spectral absorption band maxima (2020) Physical Chemistry Chemical Physics, 22 (32), pp. 18114-18123.
  • Panov, M.S., Khairullina, E.M., Vshivtcev, F.S., Ryazantsev, M.N., Tumkin, I.I. “Laser-Induced Synthesis of Composite Materials Based on Iridium, Gold and Platinum for Non-enzymatic Glucose Sensing”, (2020) Materials, 13 (15), 3359, DOI: 10.3390/ma13153359.
  • Lebedev, D., Novomlinsky, M., Kochemirovsky, V., Ryzhkov, I. , Anfimova, I. , Panov, M., Antropova, T. Glass/au composite membranes with gold nanoparticles synthesized inside pores for selective ion transport (2020) Materials, 13(7), 1767, DOI: 10.3390/MA13071767.
  • Khvorost, T. A.; Beliaev, L. Y.; Potalueva, E.; Laptenkova, A. V.; Selyutin, A. A.; Bogachev, N. A.; Skripkin, M. Yu.; Ryazantsev, M. N.; Tkachenko, N. V.; Mereshchenko, A. S. “Ultrafast Photochemistry of [Cr(NCS)6]3- Complex in Dimethylsulfoxide and Dimethylformamide upon Excitation into Ligand-Field Electronic State.” J. Phys. Chem. B, 2020, 124, 3724−3733.
  • Semenok, D.; Mereshchenko, A.S.; Medvedev, J.; Visentin, J. “Acid-Catalyzed Decomposition and Stability of Diazofuranones: Experimental and Mechanistic study” J. Phys. Org. Chem., 2020, 33, e4038
  • Volkov, S.N., Charkin, D.O., Arsent'Ev, M.Y., Povolotskiy, A.V., Stefanovich, S.Y., Ugolkov, V.L., Krzhizhanovskaya, M.G., Shilovskikh, V.V., Bubnova, R.S. Bridging the Salt-Inclusion and Open-Framework Structures: The Case of Acentric Ag4B4O7X2 (X = Br, I) Borate Halides, (2020) Inorganic Chemistry, 59 (5), pp. 2655-2658.
  • Povolotckaia, A., Korogodina, M., Pankin, D., Podkovyrova, V., Kurganov, N., Tileva, E., Tseveleva, I., Mikhailova, A., Petrov, Y., Povolotskiy, A., Borisov, E., Kurochkin, A. Investigation of the encapsulated XIIIth century French Legendarium F-403 from the Library of Russian Academy of Science, (2020) Journal of Cultural Heritage (in press).

2019

  • Mohammad Kassem, Maria Bokova, Andrey S. Tverjanovich, Daniele Fontanari, David Le Coq, Anton Sokolov, Pascal Masselin, Shinji Kohara, Takeshi Usuki, Alex C Hannon, Chris J. Benmore, and Eugene Bychkov, Bent HgI2 Molecules in the Melt and Sulfide Glasses: Implications for Non-Linear Optics, Chemistry of Materials, 31, 11, (2019) 4103-4112, DOI: 10.1021/acs.chemmater.9b00860
  • Yuriy Tverjanovich, Andrey Tverjanovich, Anatoliy Averyanov, Maksim Panov, Mikhail Ilyshin, Mikhail Balmakov. Chapter 25. Interaction of Laser Radiation with Explosives, Applications and Perspectives: Recent Advances. In “Progress in Photon Science Basics and Applications” ed. by K. Yamanouchi, S. Tunik, A. Makarov. Springer Nature Switzerland AG 2019, ISSN 0172-6218, Springer Series in Chemical Physics, ISBN 978-3-030-05973-6, pp. 493-511.; DOI: 10.1007/978-3-030-05974-3_25
  • Ryazantsev, M.N., Nikolaev, D.M., Struts, A.V. and Brown, M.F., 2019. Quantum mechanical and molecular mechanics modeling of membrane-embedded rhodopsins. The Journal of Membrane Biology, 252(4-5), pp.425-449. DOI 10.1007/s00232-019-00095-0
  • Nikolaev, D.M., Osipov, D.E., Strashkov, D.M., Vyazmin, S.Y., Akulov, V.E., Kravtcov, D.V., Chakchir, O.B., Panov, M.S. and Ryazantsev, M.N., 2019. Molecular mechanisms of adaptation to the habitat depth in visual pigments of A. subulata and L. forbesi squids: on the role of the S270F substitution. Journal of Integrated OMICS, 9(1), pp.44-50.
  • Nikolaev, D.M., Panov, M.S., Shtyrov, A.A., Boitsov, V.M., Vyazmin, S.Y., Chakchir, O.B., Yakovlev, I.P. and Ryazantsev, M.N., 2019. Perspective tools for optogenetics and photopharmacology: from design to implementation. In Progress in Photon Science (pp. 139-172). Springer, Cham.
  • G. O. Abdrashitov, A. O. Aver’yanov, M. D. Bal’makov, M. A. Ilyushin, A. S. Tver’yanovich, Yu. S. Tver’yanovich. Effect of Graphene Additions on the NCP Initiation Threshold in Spectrum-Selective Excitation. Russian Journal of Applied Chemistry. 2019, Volume 92, Issue 2, pp 248–253; DOI https://doi.org/10.1134/S1070427219020125;
  • Kuzmenko A. V., Tverjanovich A. S., Ilyushin M. A. and Tveryanovich Yu. S. The effect of the concentration of high-absorbing inclusions on the laser initiation threshold of energetic materials: model and experiment. Journal of Energetic Materials V.37 No4 (2019) 420-432. doi.org/10.1080/07370652.2019.1630028;
  • Medvedeva, X.; Vidyakina, A.; Li, F.; Mereshchenko, A.; Klinkova, A. “Reductive and coordinative effects of hydrazine in structural transformations of copper hydroxide nanoparticles” Nanomaterials, 2019, 9, 1445.
  • Danilkina, N.A., Bukhtiiarova, N.S., Govdi, A.I., Vasileva, A.A., Rumyantsev, A.M., Volkov, A.A., Sharaev, N.I., Povolotskiy, A.V., Boyarskaya, I.A., Kornyakov, I.V., Tokareva, P.V., Balova, I.A. Synthesis and properties of 6-aryl-4-azidocinnolines and 6-Aryl-4-(1,2,3-1H-triazol-1-yl)cinnolines, (2019) Molecules, 24 (13), № 2386.
  • Panov, M., Aliabev, I., Khairullina, E., Mironov, V., Tumkin, I. Fabrication of nickel-gold microsensor using in situ laser-induced metal deposition technique (2019) Journal of Laser Micro Nanoengineering, 14(3), pp. 266-239, DOI: 10.2961/jlmn.2019.03.0011.
  • Smikhovskaia, A.V., Andrianov, V.S., Khairullina, E.M., Lebedev, D.V., Ryazantsev, M.N., Panov, M.S., Tumkin, I.I. In situ laser-induced synthesis of copper‑silver microcomposite for enzyme-free D-glucose and L-alanine sensing (2019) Applied Surface Science, 488, pp. 531-536, DOI: 10.1016/j.apsusc.2019.05.061.
  • Nikolaev, D.M., Osipov, D.E., Strashkov, D.M., Vyazmin, S.Y., Akulov, V.E., Kravtcov, D.V., Chakchir, O.B., Panov, M.S., Ryazantsev, M.N. Molecular mechanisms of adaptation to the habitat depth in visual pigments of A. subulata and L. forbesi squids: On the role of the S270F substitution (2019) Journal of Integrated OMICS, 9(1), pp. 44-50, DOI: 10.5584/jiomics.v9i1.273.
  • Tumkin, I.I., Khairullina, E.M., Myund, L.A., Logunov, L.S., Gordeychuk, D.I., Panov, M.S., Kochemirovsky, V.A. Spectroscopic and theoretical studies of potassium sodium l-(+)-tartrate tetrahydrate and l-tartaric acid used as precursors for in situ laser-induced deposition of the catalytically active copper microstructures (2019) Optical and Quantum Electronics, 51(3), 89, DOI: 10.1007/s11082-019-1800-5.
  • Baranauskaite, V.E., Novomlinskii, M.O., Tumkin, I.I., Khairullina, E.M., Mereshchenko, A.S., Balova, I.A., Panov, M.S., Kochemirovsky, V.A. In situ laser-induced synthesis of gas sensing microcomposites based on molybdenum and its oxides (2019) Composites Part B: Engineering, 157, pp. 322-330, DOI: 10.1016/j.compositesb.2018.08.008.

2018

  • M.V. Kurushkin, V.A. Markov, A.V. Semencha, M.D. Mikhailov, A.S. Tverjanovich, A.L. Shakhmin and T.V. Larionova, V.D. Andreeva, Determination of AsSI-SbSI glasses short-range structure via Raman spectroscopy, XPS and XRD, International Journal of Applied Glass Science, 2018, V.9, (1), 85-89. DOI: 10.1111/ijag.12279.
  • Andrey Tverjanovich, Arnaud Cuisset, Daniele Fontanari, Eugene Bychkov, Structure of Se-Te glasses by Raman spectroscopy and DFT modeling. Journal of the American Ceramic Society 2018 V101 No11 P.5188-5197, DOI: 10.1111/jace.15758
  • Y. S. Tveryanovich, A. A. Razumtcev, T. R. Fazletdinov, A. S. Tverjanovich, E. N. Borisov. Fabrication of stoichiometric oriented Ag2Se thin film by laser ablation. Thin Solid Films. V. 666 (2018), pp. 172-176. https://doi.org/10.1016/j.tsf.2018.09.036;
  • A. A. Razumtseva, Yu. S. Tveryanovicha , A. S. Tverjanovicha , V. V. Tomaev. The Influence of the V2O5 ⋅ GeO2 Glass Phase on the Properties of AgI Nanolayers. Russian Journal of Physical Chemistry B, 2018, Vol. 12, No. 4, pp. 617–619.;
  • M. A. Ilyushin, A. S. Tver’yanovich, Yu. S. Tver’yanovich, G. O. Abdrashitov, A. O. Aver’yanov, M. D. Bal’makov. Laser Initiation of Photo- and Thermal Processes on a Pentaammine (5-Nytrotetrazolato-N2) Cobalt(III) Perchlorate Example. Glass Physics and Chemistry. 2018, V. 44, Issue 2, pp 120–122.
  • Mereshchenko, A. S.; Myasnikova, O. S.; Olshin, P. K.; Matveev, S. M.; Panov, M.S.; Kochemirovsky, V.A.; Skripkin, M.Yu.; Tarnovsky, A.N. “Ultrafast Excited-State Dynamics of Ligand-Field and Ligand-to-Metal Charge-Transfer States of CuCl42– in Solution: A Detailed Transient Absorption Study” J. Phys. Chem. B, 2018, 122, 10558–10571.
  • Smikhovskaia, A.V., Panov, M.S., Tumkin, I.I., Khairullina, E.M., Ermakov, S.S., Balova, I.A., Ryazantsev, M.N., Kochemirovsky, V.A. In situ laser-induced codeposition of copper and different metals for fabrication of microcomposite sensor-active materials (2018) Analytica Chimica Acta, 1044, pp. 138-146, DOI: 10.1016/j.aca.2018.07.042.
  • Nikolaev, D.M., Shtyrov, A.A., Panov, M.S., Jamal, A., Chakchir, O.B., Kochemirovsky, V.A., Olivucci, M., Ryazantsev, M.N. A Comparative Study of Modern Homology Modeling Algorithms for Rhodopsin Structure Prediction (2018) ACS Omega, 3(7), pp. 7555-7566, DOI: 10.1021/acsomega.8b00721.
  • Logunov, L.S., Panov, M.S., Myund, L.A., Tumkin, I.I., Khairullina, E.M., Ryazantsev, M.N., Balova, I.A., Kochemirovsky, V.A. Influence of a ligand nature on the in situ laser-induced synthesis of the electrocatalytically active copper microstructures (2018) Arabian Journal of Chemistry, 11(5), pp. 624-634, DOI: j.arabjc.2017.11.003.
  • Olshin, P.K.; Myasnikova, O.S.; Kashina, M.V.; Gorbunov, A.O.; Bogachev, N.A.; Kompanets, V.O.; Chekalin, S.V.; Pulkin, S.A.; Kochemirovsky, V.A.; Skripkin, M.Yu.; Mereshchenko, A.S. “The electronic spectra and the structures of the individual copper(II) chloride and bromide complexes in acetonitrile according to steady-state absorption spectroscopy and DFT/TD-DFT calculations.” Chem. Phys. 2018, 503, 14-19.

2017

  • A. Tverjanovich, A. Grevtsev and S. Bereznev, Interaction of CuCl2 with poly(ethylene glycol) under microwave radiation Mater. Res. Express 4 N1 (2017) 015006. DOI: 10.1088/2053-1591/aa52d0
  • Himics, D., Strizik, L., Holubova, J., Benes, L., Palka, K., Frumarova, B., Oswald, J., Tverjanovich, A.S., Wagner, T, Physico-chemical and optical properties of Er3+-doped and Er3+/Yb3+-co-doped Ge25Ga9.5Sb0.5S65 chalcogenide glass, Pure and Applied Chemistry, V. 89, Issue 4, 1 April 2017, Pages 429-436. DOI 10.1515/pac-2016-1103.
  • A. S. Grevtsev, O. V. Levin, A. S. Tverjanovich Microwave assisted polyol synthesis of CuGaSe2 nanoparticles for solar cell application, Functional Materials Letters, 2017, V.10, No4, 1750050, (4 pages). DOI: 10.1142/S1793604717500503
  • Sergei Bereznev, Hrachya Kocharyan, Natalia Maticiuc, Revathi Naidu, Olga Volobujeva, Andrey Tverjanovich, and Julia Kois, One-stage pulsed laser deposition of conductive zinc oxysulfide layers. Applied Surface Science 425 (2017) 722-727. DOI: 10.1016/j.apsusc.2017.07.078
  • D.V. Pan'kin, М.V. Sukhanov, Yu.S. Tver'yanovich, М.F. Churbanov. Investigation of structure of GeS1.35 glasses with the use of isotopically enriched germanium and Raman scattering spectroscopy. Journal of Non-Crystalline Solids 457 (2017) p.164–168
  • M.A.Ilyushin, A.S.Kozlov, A.V.Smirnov, A.S.Tver’yanovich, Yu.S.Tver’yanovich, G.O.Abdrashitov, A.O.Aver’yanov, M.D.Bal’makov. The effect of carbon nanoparticles on the thermal and photolytic properties of the (5-nitrotetrazolato-N2) pentaammin-cobalt(III) perchlorate complex. // Glass Physics and Chemistry. 2017, V. 43, N1, pp 111–113
  • Tver’yanovich, Yury, Fokina, S., Borisov, E. Super-Ionic Nano-Composite Solid Electrolytes Prepared by Laser Ablation. Chapter 25 in “Progress in Photon Science, Basics and Applications”. Editors: Yamanouchi, Kaoru. Springer. 2017. Pages 253-261
  • A. A. Razumtsev, Yu. S. Tver’yanovich, Fahd S. Khan, I. E. Kolesnikov, A. V. Kurochkin. Spectral properties of glass (15Ga2S3 · 85GeS2) doped with erbium. Glass Physics and Chemistry. 2017, Volume 43, Issue 4, pp 298–301 .
  • V. V. Tomaev, Yu. S. Tver’yanovich, M. D. Bal’makov. Methods of Control over the Phase Composition of Nanostructured Silver Iodide. Russian Journal of Electrochemistry, 2017, Vol. 53, No. 7, pp. 777–781
  • A. V. Kuz’menko, Yu. S. Tver’yanovich. Distribution of Nonequilibrium Carriers in the Region of a p–n Junction under Various Photogeneration Conditions. Glass Physics and Chemistry, 2017, Vol. 43, No. 5, pp. 421–428.
  • G. O. Abdrashitov, A. O. Aver’yanov, M. D. Bal’makov, M. A. Ilyushin, A. S. Tverjanovich, Yu. S. Tver’yanovich. Decomposition of pentaammineaquacobalt(III) perchlorate under laser radiation action. Russian Journal of General Chemistry. 2017, V.87, Issue 7, pp 1451–1455.
  • M. A. Ilyushin, Yu. S. Tverjanovich, A. S. Tverjanovich, A. O. Aver’yanov, A. V. Smirnov, I. V. Shugalei. On the mechanism of cobalt(III) aminates pyrolysis. Russian Journal of General Chemistry. 2017, Volume 87, Issue 11, pp 2600–2604 .
  • Panov, M.S., Vereshchagina, O.A., Ermakov, S.S., Tumkin, I.I., Khairullina, E.M., Skripkin, M.Y., Mereshchenko, A.S., Ryazantsev, M.N., Kochemirovsky, V.A. Non-enzymatic sensors based on in situ laser-induced synthesis of copper-gold and gold nano-sized microstructures (2017) Talanta, 16, pp. 201-207., DOI: 10.1016/j.talanta.2017.01.089.
  • Mereshchenko, A.S., Myasnikova, O.S., Panov, M.S., Kochemirovsky, V.A., Skripkin, M.Y., Budkina, D.S., Tarnovsky, A.N. Solvent effects of on nonradiative relaxation dynamics of low-energy ligand-field excited states: a CuCl42- complex (2017) Journal of Physical Chemistry B, 121(17), pp. 4562-4568., DOI: 10.1021/acs.jpcb.7b02015.
  • Shishkova, E.V., Tumkin, I.I., Kochemirovskii, V.A., Panov, M.S., Gordeychuk, D.I., Bal’makov, M.D. Micro- and nanocomposite particles of the Cu–TiO2 system (2017) Glass Physics and Chemistry, 43 (4), pp. 335-339., DOI: 10.1134/S1087659617040162.
  • Ryazantsev, M.N., Nikolaev, D.M., Emelyanov, A., Boitsov, V.M., Panov, M.S. A voltage-dependent fluorescent indicator for optogenetic applications, archaerhodopsin-3: Structure and optical properties from in silico modeling (2017) F1000Research, 6, Number 33, DOI: 10.12688/f1000research.10541.2.
  • Grechukha, N.M., Gorshkova, K.O., Panov, M.S., Tumkin, I.I., Kirillova, E.O., Lukianov, V.V., Kirillova, N.P., Kochemirovsky, V.A. Analysis of the aging processes of writing ink: Raman spectroscopy versus gas chromatography aspects (2017) Applied Sciences (Switzerland), 7 (10), Article number 991, DOI: 10.3390/app7100991.
  • Rodina, L.L., Baranovskii, V.I., Galkina, O.S., Nikolaev, V.A., Tonogina, N.L., Povolotskiy, A.V. Light-Induced Reactions of Diazotetrahydrofuranone without Elimination of Nitrogen: Experimental and Mechanistic Study, (2017) Journal of Organic Chemistry, 82 (21), pp. 11399-11405.

2016

  • Kseniia O. Gorshkova, Ilya I. Tumkin, Liubov A. Myund, Andrey S. Tverjanovich, Andrey S. Mereshchenko, Maxim S. Panov, Vladimir A. Kochemirovsky, The investigation of dye aging dynamics in writing inks using Raman spectroscopy, Dyes and Pigments, 131 (2016) 239-245 DOI: 10.1016/j.dyepig.2016.04.009.
  • A. Tverjanovich, G. Abdrashitov, A. Averyanov, M. Ilyushin, A. Smirnov, Yu. Tveryanovich. Laser induced decomposition of [Co(NH3)5(CN5O2)](ClO4)2. International Journal of Energetic Materials and Chemical Propulsion. DOI: 10.1615/Int. J. Energetic Materials Chem. Prop.2015015443 (2016)
  • Tveryanovich, Yu. S.; Fokina, S. V.; Kurochkin, A. V.; Borisov, E. N.; Krzhizhanovskaya, M. G.; Bal’makov M.D. Temperature Hysteresis of AgI Phase Transition in AgI–Chalcogenide Glass Nanolayered Films. Glass Physics and Chemistry, 2016, Vol. 42, No. 2, pp. 172–176.
  • Yu. S. Tver’yanovich, S. V. Fokina, and A. S. Tver’yanovich. Chalcogenide Glass for AgI–Based Nanolayered Films. Glass Physics and Chemistry, 2016, Vol. 42, No. 6, pp. 530–534
  • Yury S. Tveryanovich, Andrei V. Bandura, Svetlana V. Fokina, Evgeny N. Borisov, Robert A. Evarestov. Nanolayered solid electrolyte (GeSe2)30(Sb2Se3)30(AgI)40/AgI: A new hypothesis for the conductivity mechanism in layered AgI.// Solid State Ionics, 294 , (2016) 82–89
  • Panov, M.S., Tumkin, I.I., Mironov, V.S., Khairullina, E.M., Smikhovskaia, A.V., Ermakov, S.S., Kochemirovsky, V.A. Sensory properties of copper microstructures deposited from water-based solution upon laser irradiation at 532 nm (2016) Optical and Quantum Electronics, 48 (11), art. no. 490, DOI: 10.1007/s11082-016-0758-9.
  • Gorshkova, K.O., Tumkin, I.I., Myund, L.A., Tverjanovich, A.S., Mereshchenko, A.S., Panov, M.S., Kochemirovsky, V.A. The investigation of dye aging dynamics in writing inks using Raman spectroscopy (2016) Dyes and Pigments, 131, pp. 239-245., DOI: 10.1016/j.dyepig.2016.04.009.
  • Mereshchenko, A.S., Olshin, P.K., Myasnikova, O.S., Panov, M.S., Kochemirovsky, V.A., Skripkin, M.Y., Moroz, P.N., Zamkov, M., Tarnovsky, A.N. Ultrafast photochemistry of copper(II) monochlorocomplexes in methanol and acetonitrile by broadband deep-UV-to-near-IR femtosecond transient absorption spectroscopy (2016) Journal of Physical Chemistry A, 120 (11), pp. 1833-1844, DOI: 10.1021/acs.jpca.5b12509.
  • Panov, M.S., Tumkin, I.I., Smikhovskaia, A.V., Khairullina, E.M., Gordeychuk, D.I., Kochemirovsky, V.A. High rate in situ laser-induced synthesis of copper nanostructures performed from solutions containing potassium bromate and ethanol (2016) Microelectronic engineering, 157, pp. 13-18, DOI: 10.1016/j.mee.2016.02.014.
  • Svetlana V. Fokina, Eugene N. Borisov, Vladimir V. Tomaev, Ilya I. Tumkin, Yuri S. Tveryanovich. AgI thin films prepared by laser ablation.// Solid State Ionics 297 (2016) 64–67
  • Lyadinskaya, V.V., Lin, S.-Y., Michailov, A.V., Povolotskiy, A.V., Noskov, B.A. Phase Transitions in DNA/Surfactant Adsorption Layers, (2016) Langmuir, 32 (50), pp. 13435-13445.
  • Kolesnikov, I.E., Povolotskiy, A.V., Mamonova, D.V., Lähderanta, E., Manshina, A.A., Mikhailov, M.D. Photoluminescence properties of Eu3+ ions in yttrium oxide nanoparticles: Defect: Vs. Normal sites, (2016) RSC Advances, 6 (80), pp. 76533-76541.
  • Bashouti, M.Y., Povolotckaia, A.V., Povolotskiy, A.V., Tunik, S.P., Christiansen, S.H., Leuchs, G., Manshina, A.A. Spatially-controlled laser-induced decoration of 2D and 3D substrates with plasmonic nanoparticles, (2016) RSC Advances, 6 (79), pp. 75681-75685.

Student information

We invite students from 1 to 5 courses to the laboratory to perform final qualifications and grant work in the following areas:

  • New optoelectronic and nanocomposite materials (Prof. Yu. Tveryanovich This email address is being protected from spambots. You need JavaScript enabled to view it.)
  • Molecular-plasmon nanostructures and laser-induced modification Dr. A. Povolotskiy This email address is being protected from spambots. You need JavaScript enabled to view it.)
  • Fast chemical process (Dr. A. Mereshchenko This email address is being protected from spambots. You need JavaScript enabled to view it.)
  • Chalcogenide glasses for optoelectronics (Ph.D. A. Tverjanovich This email address is being protected from spambots. You need JavaScript enabled to view it.)
  • Opto-biology (Ph.D. M. Ryazantsev This email address is being protected from spambots. You need JavaScript enabled to view it.)
  • Sensors (Ph.D. M. Panov This email address is being protected from spambots. You need JavaScript enabled to view it.)